chr6:132572573:G>A Detail (hg38)

Information

Genome

Assembly Position
hg19 chr6:132,893,712-132,893,712 View the variant detail on this assembly version.
hg38 chr6:132,572,573-132,572,573

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.426
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
<0.001 Mental Depression In this study we investigated for the first time the possible association betwee... BeFree 20493543 Detail
0.006 bipolar disorder We have further studied a previously investigated sample of 187 major depressive... BeFree 19582769 Detail
Annotation

Annotations

DescrptionSourceLinks
In this study we investigated for the first time the possible association between a set of TAAR6 gen... DisGeNET Detail
We have further studied a previously investigated sample of 187 major depressive disorder (MDD) pati... DisGeNET Detail
Gene
-
dbSNP
rs4305745 dbSNP
Genome
hg38
Position
chr6:132,572,573-132,572,573
Variant Type
snv
Reference Allele
G
Alternative Allele
A
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs4305745
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.4258
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
7136
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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